A sample DESeqResults
object, generated with DESeq2
Details
This DESeqResults
object contains the results of a Differential
Expression Analysis performed on data from the macrophage
package, more
precisely contrasting the counts from macrophage associated with IFNg to
those associated with IFNg and Salmonella.
The code to create said object can be found in the folder /inst/scripts
in
the DeeDeeExperiment package, the file is called generate_data.R
.
References
Alasoo, et al. "Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response", Nature Genetics, January 2018 doi: 10.1038/s41588-018-0046-7.
See also
Other DEresus:
IFNg_naive
,
Salm_both
,
Salm_naive