Package index
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beautify_GO_table() - Beautifying an enrichment table with GO identifiers in it
 
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beautify_Reactome_table() - Beautifying an enrichment table with Reactome identifiers in it
 
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count_up_till_death() - Prints out the timestamp
 
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create_DEresults() - Title
 
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create_folder_structure() - Create folder structure
 
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create_link_reactome() - Create a link to Reactome
 
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dds_gencode_to_ensembl() - Gencode to ENSEMBL
 
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deseq_normcounts_with_info() - Normalized counts table, with extra info
 
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deseq_tpm_with_info() - TPM table with extended information
 
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exportr() - Export the components of a resuSet object
 
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fortify_annotations() - Fortify different set of annotations
 
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matmetmaker_RNAseqbulk() - M&Ms maker
 
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matmetmaker_RNAseqsinglecell() - Title TODO
 
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plot_totcounts() - Plot total number of counts
 
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resuset_to_gtl() - Convert a resuSet into a GeneTonicList
 
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run_salmon() - Generate commands to run salmon
 
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samplesheet_creator() - Title
 
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sepguesser() - Make an educated guess on the separator character
 
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sessioninfo_extra() - Title