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Changelog

Source: NEWS.md

EMMA 0.99.4

  • Addressed the points raised in the Bioc review.

EMMA 0.99.0

  • Ready for Bioconductor submission!

EMMA 0.3.0

  • Added the initial implementation of EMMA_freeze().
  • EMMA_explain() now returns also citations of the used packages.
  • Renamed getEMMARecord() to EMMA_get_record() for consistency.
  • Resizing toy data to speed up examples.
  • Updated the vignette.
  • Updating unit tests.

EMMA 0.2.0

  • EMMA_run() can accept custom functions and wrappers and collect metadata based on which function was used in the wrapper.
  • Added EMMA_add_custom_metadata() to give the user manual/easy access to modify user_metdata field in EMMA_record.
  • Added a fully runnable vignette.

EMMA 0.1.0

  • EMMA_run() captures a function call, executes the FEA analysis, and returns the results in their native format while attaching structured metadata to the result object as attribute.
  • EMMA_run() can now capture information from functions in mosdef, gprofiler2, and 5 commonly used functions from clusterProfiler.
  • EMMA_show() prints the captured metadata in a more user-friendly format.
  • Added getEMMARecord() to fetch all metadata stored in the attributes of an object returned by EMMA_run().
  • Added toy data.
  • Added the initial implementation of EMMA_explain.

EMMA 0.0.1

EMMA 0.0.0.9000

  • Added a NEWS.md file to track changes to the package.