EMMA_get_record

EMMA_get_record

Usage

EMMA_get_record(res)

Arguments

res

Functional Enrichment Analysis results (enrichResult, gseaResult ...) generated by EMMA_run()

Value

list of metadata recorded during FEA runtime

See also

enrichGO(), groupGO(), gseGO(), gseKEGG(), enrichKEGG(), gost(), run_cluPro(), run_topGO(), run_goseq()

Examples

data("fea_res", package = "EMMA")
EMMA_get_record(fea_res)
#> $method
#> $method$call
#> gprofiler2::gost(query = de_res_IFNg_vs_naive$SYMBOL, organism = "hsapiens", 
#>     correction_method = "fdr", custom_bg = universe, sources = "GO:BP")
#> 
#> $method$function_name
#> [1] "gost"
#> 
#> $method$package_name
#> [1] "gprofiler2"
#> 
#> $method$package_version
#> [1] "0.2.4"
#> 
#> $method$wrapped_function
#> NULL
#> 
#> $method$wrapped_package
#> NULL
#> 
#> $method$wrapper
#> [1] FALSE
#> 
#> 
#> $input
#> $input$arguments
#> $input$arguments$query
#> de_res_IFNg_vs_naive$SYMBOL
#> 
#> $input$arguments$organism
#> [1] "hsapiens"
#> 
#> $input$arguments$correction_method
#> [1] "fdr"
#> 
#> $input$arguments$custom_bg
#> universe
#> 
#> $input$arguments$sources
#> [1] "GO:BP"
#> 
#> 
#> 
#> $annotation
#> $annotation$organism
#> [1] "hsapiens"
#> 
#> $annotation$gene_set_db
#> [1] "GO:BP"
#> 
#> $annotation$gene_set_db_version
#>                                                GO:BP 
#> "annotations: BioMart\nclasses: releases/2026-01-23" 
#> 
#> 
#> $timestamp
#> [1] "2026-05-06 10:13:37 UTC"
#> 
#> $session_info
#> NULL
#> 
#> $extra
#> list()
#> 
#> $emma_version
#> [1] "0.2.0"
#>